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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904904.1_cds_XP_016455006.1_48975
CDS Infomation

[gene=LOC107779161] [db_xref=GeneID:107779161] [protein=2-oxoglutarate-dependent dioxygenase AOP3-like] [protein_id=XP_016455006.1] [location=complement(join(25941..26180,33332..33656,34337..34713))] [gbkey=CDS]
Sequence

ATGGCTTCCCAAGTAGAACCAAAGCTTCCCATTATTGAGTTCACTGATGAAAACTTGAGC
AGTGGCACAACCTCTTGGATATCAACATCCCAGGAAATCCGACGTGCACTGGAAGAGTAT
GGCTGCTTTGCGGCAGTGTACAAGAAAGTGTCACCGGAGCTCCGGGAAGCCATGTTCAAT
CACTGTAAGGAGTTGTTCCAGCTCCCTTTAGAAGCTAAACTCCAAAATACTTCTGATGTT
TTGGGGTTTGGATATGGTGGAAATTTCCCTAACATGCCTCTAGCTGAATACTTTGGCATT
GAAAATGGTGGCACTCTTGGCTCAACCAAGAATTTCGCTAAGCAGATGTGGCCTAATGGC
AACGTCGATAAATTTTGTGAAGAAACGATTTCATACTCTAAATTAATTGTTGAACTGGAC
GATGCGGTGATTCAAATGATATTGGGAAGCTATGGCTTAGAGAAATATTATGACCCTCTA
AAAAATTCGTATATGTATTTAATGAGATTCATTAAATATCGAAGCCCGAAAATAGATGAA
ATAAACATAGGTCATCTACCTCATAGAGATAAGTCATTTATGGGGATCATCGACACTAAT
CAAGTAGGAGGTTTGGAGATGCAAACAAGAGATGGAAATTGGATGACTTTCAATCCCTCC
TCTTATAAAACTGTCGTATTCATAGCTGGTGAGCCTTTCACGGCATGGAGCAATGGTAGG
GTATATGCACCAATGCATCGAGTGATTATGAAAGGAACTGAGGATAAATATTCGCTCGCG
TTATTCTCATTTATGCGTGGGACAGTGAAAATACCAGAGGAGCTAATTGATGAAGAAAAC
CCACAATATTTCAAGTCATTTGATCACTTTGAATATCTGAAATACTGTGCAACAGATGGC
TGGAAAGAGAAAAATCCCATTAAAGCCTATTGTGGTGTTTGA

Peptide Sequence

PEP ID

XP_016455006.1
PEP Infomation

PREDICTED: 2-oxoglutarate-dependent dioxygenase AOP3-like [Nicotiana tabacum]
Sequence

MASQVEPKLPIIEFTDENLSSGTTSWISTSQEIRRALEEYGCFAAVYKKVSPELREAMFN
HCKELFQLPLEAKLQNTSDVLGFGYGGNFPNMPLAEYFGIENGGTLGSTKNFAKQMWPNG
NVDKFCEETISYSKLIVELDDAVIQMILGSYGLEKYYDPLKNSYMYLMRFIKYRSPKIDE
INIGHLPHRDKSFMGIIDTNQVGGLEMQTRDGNWMTFNPSSYKTVVFIAGEPFTAWSNGR
VYAPMHRVIMKGTEDKYSLALFSFMRGTVKIPEELIDEENPQYFKSFDHFEYLKYCATDG
WKEKNPIKAYCGV

Transcript Sequence

Gene sequence data has not been registered.